PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G071200.2.p
Common NamePRUPE_ppa009401mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 187aa    MW: 19829.5 Da    PI: 10.4047
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G071200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.5e-1694130135
                GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                         C +Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  Prupe.8G071200.2.p  94 CMHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 130
                         99***99889************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF062031.4E-162365IPR010402CCT domain
PROSITE profilePS5101713.2452365IPR010402CCT domain
SMARTSM004013.8E-1088143IPR000679Zinc finger, GATA-type
SuperFamilySSF577169.03E-1191137No hitNo description
Gene3DG3DSA:3.30.50.107.9E-1492130IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.24E-1193130No hitNo description
PROSITE patternPS00344094121IPR000679Zinc finger, GATA-type
PfamPF003208.9E-1494130IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MGPVPLNQQG MNDLPVKPIQ PQRAASLSRF REKRKERCFD KKIRYTVRKE VALRMQRKKG  60
QFTSSKASSD DGGPASSGAT QGSGQDESMQ ETSCMHCGIS SKSTPMMRRG PAGPRTLCNA  120
CGLKWANKGV LTGGPKVSNI GMQDPSAKGI EQGDGEAKDS VAITMGANIA PSPNGDNSTM  180
TVDRNL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200518.11e-135hypothetical protein PRUPE_ppa009401mg
SwissprotQ8H1G01e-52GAT28_ARATH; GATA transcription factor 28
TrEMBLM5VKR31e-135M5VKR3_PRUPE; Uncharacterized protein
STRINGPOPTR_0007s03130.12e-75(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.26e-47ZIM-LIKE 2